############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/gwascat_2.24.0.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL gwascat_2.24.0.zip && rm gwascat_2.24.0.tar.gz gwascat_2.24.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 32.8M 5 1861k 0 0 1821k 0 0:00:18 0:00:01 0:00:17 1821k 14 32.8M 14 4769k 0 0 2365k 0 0:00:14 0:00:02 0:00:12 2364k 24 32.8M 24 8391k 0 0 2772k 0 0:00:12 0:00:03 0:00:09 2772k 38 32.8M 38 12.6M 0 0 3207k 0 0:00:10 0:00:04 0:00:06 3207k 55 32.8M 55 18.0M 0 0 3677k 0 0:00:09 0:00:05 0:00:04 3704k 72 32.8M 72 23.8M 0 0 4052k 0 0:00:08 0:00:06 0:00:02 4508k 91 32.8M 91 29.9M 0 0 4370k 0 0:00:07 0:00:07 --:--:-- 5179k 100 32.8M 100 32.8M 0 0 4507k 0 0:00:07 0:00:07 --:--:-- 5694k install for i386 * installing *source* package 'gwascat' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gwascat' finding HTML links ... done bindcadd_snv html chklocs html ebicat_2020_04_30 html g17SM html getRsids-gwaswloc-method html getRsids html getTraits-gwaswloc-method html getTraits html get_cached_gwascat html gg17N html gr6.0_hg38 html gw6.rs_17 html gwascat_from_AHub html gwastagger html gwaswloc-class html gwcat_snapshot html gwcex2gviz html ldtagr html locon6 html locs4trait html low17 html makeCurrentGwascat html obo2graphNEL html process_gwas_dataframe html riskyAlleleCount html si.hs.37 html si.hs.38 html sub-gwaswloc-ANY-ANY-ANY-method html subsetByChromosome-gwaswloc-method html subsetByChromosome html subsetByTraits-gwaswloc-method html subsetByTraits html topTraits html traitsManh html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'gwascat' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'gwascat' as gwascat_2.24.0.zip * DONE (gwascat) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'gwascat' successfully unpacked and MD5 sums checked