############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ggcyto_1.20.0.tar.gz && rm -rf ggcyto.buildbin-libdir && mkdir ggcyto.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ggcyto.buildbin-libdir ggcyto_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ggcyto_1.20.0.zip && rm ggcyto_1.20.0.tar.gz ggcyto_1.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 14.1M 0 36474 0 0 260k 0 0:00:55 --:--:-- 0:00:55 259k 11 14.1M 11 1646k 0 0 1424k 0 0:00:10 0:00:01 0:00:09 1424k 29 14.1M 29 4288k 0 0 1987k 0 0:00:07 0:00:02 0:00:05 1987k 52 14.1M 52 7613k 0 0 2421k 0 0:00:05 0:00:03 0:00:02 2421k 81 14.1M 81 11.4M 0 0 2839k 0 0:00:05 0:00:04 0:00:01 2839k 100 14.1M 100 14.1M 0 0 3055k 0 0:00:04 0:00:04 --:--:-- 3138k install for i386 * installing *source* package 'ggcyto' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ggcyto' finding HTML links ... done as.ggplot html autoplot html finding level-2 HTML links ... done axis_x_inverse_trans html compute_stats html flowCore_asinht_trans html fortify.ellipsoidGate html fortify.filterList html fortify.flowSet html fortify.polygonGate html fortify.rectangleGate html fortify_fs html gate_null html geom_gate html geom_hvline html geom_overlay html geom_stats html getFlowFrame html ggcyto html ggcyto_add html ggcyto_arrange html ggcyto_par_default html ggcyto_par_set html is.ggcyto html is.ggcyto_flowSet html is.ggcyto_par html labs_cyto html marginalFilter html merge.quad.gates html print.ggcyto html print.ggcyto_GatingLayout html replace_data html scale_x_flowCore_fasinh html scale_x_logicle html scales_flowjo_biexp html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/ggcyto.buildbin-libdir/00LOCK-ggcyto/00new/ggcyto/help/scale_x_flowJo_biexp.html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/ggcyto.buildbin-libdir/00LOCK-ggcyto/00new/ggcyto/help/scale_y_flowJo_biexp.html scales_flowjo_fasinh html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/ggcyto.buildbin-libdir/00LOCK-ggcyto/00new/ggcyto/help/scale_x_flowJo_fasinh.html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/ggcyto.buildbin-libdir/00LOCK-ggcyto/00new/ggcyto/help/scale_y_flowJo_fasinh.html stat_position html stats_null html transform-gate html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ggcyto' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ggcyto' as ggcyto_1.20.0.zip * DONE (ggcyto) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'ggcyto' successfully unpacked and MD5 sums checked