############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/gaia_2.36.0.tar.gz && rm -rf gaia.buildbin-libdir && mkdir gaia.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gaia.buildbin-libdir gaia_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL gaia_2.36.0.zip && rm gaia_2.36.0.tar.gz gaia_2.36.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 457k 100 457k 0 0 813k 0 --:--:-- --:--:-- --:--:-- 814k install for i386 * installing *source* package 'gaia' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gaia' finding HTML links ... done crc html crc_markers html gaia-package html generate_approx_null_hypothesis html generate_null_hypothesis html load_cnv html load_markers html peel_off html qvalue html runGAIA html search_peaks_in_regions html synthCNV_Matrix html synthMarkers_Matrix html write_significant_regions html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'gaia' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'gaia' as gaia_2.36.0.zip * DONE (gaia) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'gaia' successfully unpacked and MD5 sums checked