############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL flowViz ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’ * installing *source* package ‘flowViz’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘densityplot’ with signature ‘x="formula",data="view"’: no definition for class “view” in method for ‘densityplot’ with signature ‘x="formula",data="ncdfFlowSet"’: no definition for class “ncdfFlowSet” in method for ‘densityplot’ with signature ‘x="formula",data="ncdfFlowList"’: no definition for class “ncdfFlowList” in method for ‘histogram’ with signature ‘x="formula",data="ncdfFlowSet"’: no definition for class “ncdfFlowSet” in method for ‘histogram’ with signature ‘x="formula",data="ncdfFlowList"’: no definition for class “ncdfFlowList” in method for ‘glines’ with signature ‘x="norm2Filter",data="ANY"’: no definition for class “norm2Filter” in method for ‘glines’ with signature ‘x="norm2Filter",data="logicalFilterResult"’: no definition for class “norm2Filter” in method for ‘glines’ with signature ‘x="norm2Filter",data="flowFrame"’: no definition for class “norm2Filter” in method for ‘glpoints’ with signature ‘x="norm2Filter",data="flowFrame",channels="character"’: no definition for class “norm2Filter” in method for ‘glpolygon’ with signature ‘x="norm2Filter",data="ANY"’: no definition for class “norm2Filter” in method for ‘glpolygon’ with signature ‘x="norm2Filter",data="logicalFilterResult"’: no definition for class “norm2Filter” in method for ‘glpolygon’ with signature ‘x="norm2Filter",data="flowFrame"’: no definition for class “norm2Filter” in method for ‘gpoints’ with signature ‘x="norm2Filter",data="flowFrame",channels="character"’: no definition for class “norm2Filter” in method for ‘gpolygon’ with signature ‘x="norm2Filter",data="ANY"’: no definition for class “norm2Filter” in method for ‘gpolygon’ with signature ‘x="norm2Filter",data="logicalFilterResult"’: no definition for class “norm2Filter” in method for ‘gpolygon’ with signature ‘x="norm2Filter",data="flowFrame"’: no definition for class “norm2Filter” in method for ‘xyplot’ with signature ‘x="formula",data="view"’: no definition for class “view” in method for ‘xyplot’ with signature ‘x="view",data="missing"’: no definition for class “view” in method for ‘xyplot’ with signature ‘x="formula",data="gateView"’: no definition for class “gateView” in method for ‘xyplot’ with signature ‘x="formula",data="ncdfFlowSet"’: no definition for class “ncdfFlowSet” in method for ‘xyplot’ with signature ‘x="formula",data="ncdfFlowList"’: no definition for class “ncdfFlowList” ** help *** installing help indices ** building package indices ** installing vignettes ‘filters.Rmd’ ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flowViz)