############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/flowDensity_1.26.0.tar.gz && rm -rf flowDensity.buildbin-libdir && mkdir flowDensity.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowDensity.buildbin-libdir flowDensity_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL flowDensity_1.26.0.zip && rm flowDensity_1.26.0.tar.gz flowDensity_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 15 4396k 15 701k 0 0 1871k 0 0:00:02 --:--:-- 0:00:02 1870k 100 4396k 100 4396k 0 0 3727k 0 0:00:01 0:00:01 --:--:-- 3728k install for i386 * installing *source* package 'flowDensity' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity' ** help Warning: bad markup (extra space?) at plotDens.Rd:62:19 *** installing help indices converting help for package 'flowDensity' finding HTML links ... done CellPopulation-class html deGate html flowDensity-methods html flowDensity html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/flowDensity.buildbin-libdir/00LOCK-flowDensity/00new/flowDensity/help/flowDensity.html getPeaks html getflowFrame html nmRemove html notSubFrame html plotDens html ** building package indices ** installing vignettes 'flowDensity.Rmd' ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity' ** testing if installed package can be loaded from final location Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'flowDensity' ... ** testing if installed package can be loaded Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity' * MD5 sums packaged installation of 'flowDensity' as flowDensity_1.26.0.zip * DONE (flowDensity) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'flowDensity' successfully unpacked and MD5 sums checked