############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/fabia_2.38.0.tar.gz && rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fabia.buildbin-libdir fabia_2.38.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL fabia_2.38.0.zip && rm fabia_2.38.0.tar.gz fabia_2.38.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 203k 100 203k 0 0 849k 0 --:--:-- --:--:-- --:--:-- 851k install for i386 * installing *source* package 'fabia' ... ** using staged installation ** libs running 'src/Makefile.win' ... rm -f fabia.o fabia.dll *.a *.o *.so *.dll "C:/rtools40/mingw32/bin/"gcc -c fabiac.c -o fabia.o -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -Wall -O3 "C:/rtools40/mingw32/bin/"gcc -shared -s -static-libgcc fabia.o -L"C:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386" -lR -o fabia.dll rm -f fabia.o *.a *.o *.so installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/libs/i386 ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'fabia' finding HTML links ... done Factorization-class html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/help/L.html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/help/L+2CFactorization-method.html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/help/L+3C-.html estimateMode html extractBic html extractPlot html fabi html fabia html fabiaDemo html fabiaVersion html fabiap html fabias html fabiasp html makeFabiaData html makeFabiaDataBlocks html makeFabiaDataBlocksPos html makeFabiaDataPos html matrixImagePlot html mfsc html nmfdiv html nmfeu html nmfsc html plotBicluster html projFunc html projFuncPos html readSamplesSpfabia html readSpfabiaResult html samplesPerFeature html spfabia html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'fabia' ... ** libs running 'src/Makefile.win' ... rm -f fabia.o fabia.dll *.a *.o *.so *.dll "C:/rtools40/mingw64/bin/"gcc -c fabiac.c -o fabia.o -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -Wall -O3 "C:/rtools40/mingw64/bin/"gcc -shared -s -static-libgcc fabia.o -L"C:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64" -lR -o fabia.dll rm -f fabia.o *.a *.o *.so installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/fabia.buildbin-libdir/fabia/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'fabia' as fabia_2.38.0.zip * DONE (fabia) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'fabia' successfully unpacked and MD5 sums checked