############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf enrichTF.buildbin-libdir && mkdir enrichTF.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=enrichTF.buildbin-libdir enrichTF_1.8.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'enrichTF' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'enrichTF' finding HTML links ... done EnrichStep-class html GenBackground html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/genBackground.html finding level-2 HTML links ... done GeneOntology html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/geneOntology.html MotifsInRegions html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/motifsInRegions.html Pipelines html RegionConnectTargetGene html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/regionConnectTargetGene.html SingleSampleReport html TFsEnrichInRegions html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/tfsEnrichInRegions.html TissueOpennessConserve html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/tissueOpennessConserve.html TissueOpennessSpecificity html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/tissueOpennessSpecificity.html UnzipAndMergeBed html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/enrichTF.buildbin-libdir/00LOCK-enrichTF/00new/enrichTF/help/unzipAndMergeBed.html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in options(stringsAsFactors = TRUE) : 'options(stringsAsFactors = TRUE)' is deprecated and will be disabled ** testing if installed package can be loaded from final location Warning in options(stringsAsFactors = TRUE) : 'options(stringsAsFactors = TRUE)' is deprecated and will be disabled ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'enrichTF' ... ** testing if installed package can be loaded Warning in options(stringsAsFactors = TRUE) : 'options(stringsAsFactors = TRUE)' is deprecated and will be disabled * MD5 sums packaged installation of 'enrichTF' as enrichTF_1.8.0.zip * DONE (enrichTF)