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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/copynumber_1.32.0.tar.gz && rm -rf copynumber.buildbin-libdir && mkdir copynumber.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copynumber.buildbin-libdir copynumber_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL copynumber_1.32.0.zip && rm copynumber_1.32.0.tar.gz copynumber_1.32.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  763k  100  763k    0     0  2515k      0 --:--:-- --:--:-- --:--:-- 2520k

install for i386

* installing *source* package 'copynumber' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'copynumber'
    finding HTML links ... done
    SNPdata                                 html  
    aspcf                                   html  
    callAberrations                         html  
    getGRangesFormat                        html  
    imputeMissing                           html  
    interpolate.pcf                         html  
    lymphoma                                html  
    micma                                   html  
    multipcf                                html  
    pcf                                     html  
    pcfPlain                                html  
    plotAberration                          html  
    plotAllele                              html  
    plotChrom                               html  
    plotCircle                              html  
    plotFreq                                html  
    plotGamma                               html  
    plotGenome                              html  
    plotHeatmap                             html  
    plotSample                              html  
    selectSegments                          html  
    subsetData                              html  
    subsetSegments                          html  
    winsorize                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'copynumber' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'copynumber' as copynumber_1.32.0.zip
* DONE (copynumber)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'copynumber' successfully unpacked and MD5 sums checked