############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf cogena.buildbin-libdir && mkdir cogena.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cogena.buildbin-libdir cogena_1.26.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'cogena' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena' ** help *** installing help indices converting help for package 'cogena' finding HTML links ... done AllGeneSymbols html DEexprs html PEI html Psoriasis html clEnrich html clEnrich_one html clusterMethods html coExp html cogena_class html cogena_package html corInCluster html enrichment html gene2set html geneExpInCluster html geneInCluster html genecl_class html geneclusters html gmt2list html gmtlist2file html heatmap.3 html heatmapCluster html heatmapCmap html heatmapPEI html mat html nClusters html pClusters html sampleLabel html show html sota html summary html upDownGene html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena' ** testing if installed package can be loaded from final location Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'cogena' ... ** testing if installed package can be loaded Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena' * MD5 sums packaged installation of 'cogena' as cogena_1.26.0.zip * DONE (cogena)