############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/cisPath_1.32.0.tar.gz && rm -rf cisPath.buildbin-libdir && mkdir cisPath.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cisPath.buildbin-libdir cisPath_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL cisPath_1.32.0.zip && rm cisPath_1.32.0.tar.gz cisPath_1.32.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 713k 100 713k 0 0 2364k 0 --:--:-- --:--:-- --:--:-- 2370k install for i386 * installing *source* package 'cisPath' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cisPath.cpp -o cisPath.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o cisPath.dll tmp.def cisPath.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/cisPath.buildbin-libdir/00LOCK-cisPath/00new/cisPath/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'cisPath' finding HTML links ... done cisPath html combinePPI html easyEditor html formatPINAPPI html formatSIFfile html formatSTRINGPPI html formatiRefIndex html getMappingFile html networkView html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'cisPath' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cisPath.cpp -o cisPath.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o cisPath.dll tmp.def cisPath.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/cisPath.buildbin-libdir/cisPath/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'cisPath' as cisPath_1.32.0.zip * DONE (cisPath) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'cisPath' successfully unpacked and MD5 sums checked