############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/affycoretools_1.64.0.tar.gz && rm -rf affycoretools.buildbin-libdir && mkdir affycoretools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=affycoretools.buildbin-libdir affycoretools_1.64.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL affycoretools_1.64.0.zip && rm affycoretools_1.64.0.tar.gz affycoretools_1.64.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 12 6441k 12 790k 0 0 904k 0 0:00:07 --:--:-- 0:00:07 905k 31 6441k 31 2007k 0 0 1192k 0 0:00:05 0:00:01 0:00:04 1192k 65 6441k 65 4220k 0 0 1571k 0 0:00:04 0:00:02 0:00:02 1571k 100 6441k 100 6441k 0 0 1920k 0 0:00:03 0:00:03 --:--:-- 1921k install for i386 * installing *source* package 'affycoretools' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'affycoretools' finding HTML links ... done affycoretools-defunct html affycoretools html affystart html annotateEset html dataAndHeatmapPage html doGlimma html entrezLinks html fixHeaderAndGo html geneSetPage html finding level-2 HTML links ... done getCols html getMainProbes html gsHeatmap html intNames html make.cl html makeGoGeneTable html makeGoTable html makeHmap html makeImages html makeIndices html makeVenn html maplot html mirna2mrna html outputRomer html pca.legend html plotDeg html plotPCA html runRomer html tableFilt html venn4Way html vennCounts2 html vennInLine html vennPage html vennSelect2 html writeFit html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'affycoretools' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'affycoretools' as affycoretools_1.64.0.zip * DONE (affycoretools) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'affycoretools' successfully unpacked and MD5 sums checked