############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/VarCon_1.0.0.tar.gz && rm -rf VarCon.buildbin-libdir && mkdir VarCon.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VarCon.buildbin-libdir VarCon_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL VarCon_1.0.0.zip && rm VarCon_1.0.0.tar.gz VarCon_1.0.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 1747k 0 2487 0 0 30427 0 0:00:58 --:--:-- 0:00:58 30329 93 1747k 93 1637k 0 0 1575k 0 0:00:01 0:00:01 --:--:-- 1575k 100 1747k 100 1747k 0 0 1621k 0 0:00:01 0:00:01 --:--:-- 1622k install for i386 * installing *source* package 'VarCon' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'VarCon' finding HTML links ... done calculateHZEIperNT html calculateMaxEntScanScore html gene2transcript html generateHEXplorerPlot html getMaxEntInfo html getSeqInfoFromVariation html hbg html hex html prepareReferenceFasta html referenceDnaStringSet html startVarConApp html transCoord html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'VarCon' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'VarCon' as VarCon_1.0.0.zip * DONE (VarCon) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'VarCon' successfully unpacked and MD5 sums checked