############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Sushi ### ############################################################################## ############################################################################## * checking for file ‘Sushi/DESCRIPTION’ ... OK * preparing ‘Sushi’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Sushi.Rnw’ using Sweave Loading required package: zoo Attaching package: ‘zoo’ The following objects are masked from ‘package:base’: as.Date, as.Date.numeric Loading required package: biomaRt Ensembl site unresponsive, trying uswest mirror Error: processing vignette 'Sushi.Rnw' failed with diagnostics: chunk 33 Error in bmRequest(request = request, httr_config = martHTTRConfig(mart), : Gateway Timeout (HTTP 504). --- failed re-building ‘Sushi.Rnw’ SUMMARY: processing the following file failed: ‘Sushi.Rnw’ Error: Vignette re-building failed. Execution halted