############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/SplicingGraphs_1.32.0.tar.gz && rm -rf SplicingGraphs.buildbin-libdir && mkdir SplicingGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SplicingGraphs.buildbin-libdir SplicingGraphs_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SplicingGraphs_1.32.0.zip && rm SplicingGraphs_1.32.0.tar.gz SplicingGraphs_1.32.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 7 45.5M 7 3308k 0 0 3248k 0 0:00:14 0:00:01 0:00:13 3247k 18 45.5M 18 8409k 0 0 4139k 0 0:00:11 0:00:02 0:00:09 4138k 29 45.5M 29 13.2M 0 0 4496k 0 0:00:10 0:00:03 0:00:07 4496k 39 45.5M 39 18.1M 0 0 4640k 0 0:00:10 0:00:04 0:00:06 4640k 54 45.5M 54 24.6M 0 0 5038k 0 0:00:09 0:00:05 0:00:04 5075k 71 45.5M 71 32.5M 0 0 5547k 0 0:00:08 0:00:06 0:00:02 6016k 90 45.5M 90 41.1M 0 0 5983k 0 0:00:07 0:00:07 --:--:-- 6733k 100 45.5M 100 45.5M 0 0 6098k 0 0:00:07 0:00:07 --:--:-- 7138k install for i386 * installing *source* package 'SplicingGraphs' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' ** help *** installing help indices converting help for package 'SplicingGraphs' finding HTML links ... done SplicingGraphs-class html SplicingGraphs-package html TSPCsg html assignReads html bubbles-methods html countReads-methods html plotTranscripts-methods html rsgedgesByGene-methods html sgedges-methods html sgedgesByGene-methods html sgraph-methods html toy_data html txpath-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' ** testing if installed package can be loaded from final location Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SplicingGraphs' ... ** testing if installed package can be loaded Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' * MD5 sums packaged installation of 'SplicingGraphs' as SplicingGraphs_1.32.0.zip * DONE (SplicingGraphs) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'SplicingGraphs' successfully unpacked and MD5 sums checked