############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/RpsiXML_2.34.0.tar.gz && rm -rf RpsiXML.buildbin-libdir && mkdir RpsiXML.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RpsiXML.buildbin-libdir RpsiXML_2.34.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RpsiXML_2.34.0.zip && rm RpsiXML_2.34.0.tar.gz RpsiXML_2.34.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 55 1990k 55 1095k 0 0 2249k 0 --:--:-- --:--:-- --:--:-- 2249k 100 1990k 100 1990k 0 0 2784k 0 --:--:-- --:--:-- --:--:-- 2784k install for i386 * installing *source* package 'RpsiXML' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RpsiXML' finding HTML links ... done BIOGRID.PSIMI25 html availableXrefs-methods html availableXrefs html bait html buildPCHypergraph html complexName html complexes html eListHandler html getAbstractByPMID html graphSpeciesConverter html interactionType html interactions html interactorInfo-methods html interactorInfo html interactors html list2Matrix html null2na html numInteractions-methods html parsePsimi25Interaction html psimi25Attribute-class html psimi25Complex-class html psimi25ComplexEntry-class html psimi25Experiment-class html psimi25Graph-class html psimi25Hypergraph-class html psimi25Hypergraph2GraphNEL html psimi25Interaction-class html psimi25InteractionEntry-class html psimi25Interactor-class html psimi25Source-class html psimi25XML2Graph html separateXMLDataByExpt html sourceId-methods html taxId-methods html translateID-methods html translateID html uniprot-methods html uniprot html validatePSIMI25 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RpsiXML' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'RpsiXML' as RpsiXML_2.34.0.zip * DONE (RpsiXML) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'RpsiXML' successfully unpacked and MD5 sums checked