############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ROntoTools_2.20.0.tar.gz && rm -rf ROntoTools.buildbin-libdir && mkdir ROntoTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ROntoTools.buildbin-libdir ROntoTools_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ROntoTools_2.20.0.zip && rm ROntoTools_2.20.0.tar.gz ROntoTools_2.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 35 1149k 35 403k 0 0 1202k 0 --:--:-- --:--:-- --:--:-- 1203k 100 1149k 100 1149k 0 0 1870k 0 --:--:-- --:--:-- --:--:-- 1868k install for i386 * installing *source* package 'ROntoTools' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ROntoTools' finding HTML links ... done KEGGpathway2Graph html Summary-pDisRes-method html Summary-peRes-method html alpha1MR html alphaMLG html compute.fisher html compute.normalInv html keggPathwayGraphs html finding level-2 HTML links ... done keggPathwayNames html nodeWeights html pDis html pDisPathway-class html pDisRes-class html pe html peEdgeRenderInfo html peNodeRenderInfo html pePathway-class html peRes-class html plot.pePathway-methods html plot.peRes-methods html setEdgeWeights html setNodeWeights html subGraphByNodeType html summary.pDisRes html summary.peRes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ROntoTools' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ROntoTools' as ROntoTools_2.20.0.zip * DONE (ROntoTools) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'ROntoTools' successfully unpacked and MD5 sums checked