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### Running command:
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###   C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch PREDA
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* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
* installing *source* package 'PREDA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PREDA'
    finding HTML links ... done
    DataForPREDA-class                      html  
    DataForPREDA2GenomicAnnotationsForPREDA
                                            html  
    DataForPREDA2StatisticsForPREDA         html  
    DataForPREDA2dataframe                  html  
    DataForPREDAMedianCenter                html  
    GenomicAnnotations-class                html  
    GenomicAnnotations2GenomicAnnotationsForPREDA
                                            html  
    GenomicAnnotations2dataframe            html  
    GenomicAnnotations2reference_positions
                                            html  
    GenomicAnnotationsExtract               html  
    GenomicAnnotationsFilter_neg            html  
    GenomicAnnotationsFilter_pos            html  
    GenomicAnnotationsForPREDA-class        html  
    GenomicAnnotationsForPREDA2GenomicAnnotations
                                            html  
    GenomicAnnotationsForPREDA2PREDAResults
                                            html  
    GenomicAnnotationsForPREDA2dataframe    html  
    GenomicAnnotationsForPREDAFromfile      html  
    GenomicAnnotationsFromLibrary           html  
    GenomicAnnotationsFromdataframe         html  
    GenomicAnnotationsFromfile              html  
    GenomicAnnotationsSortAndCleanNA        html  
    GenomicRegions-class                    html  
    GenomicRegions2dataframe                html  
    GenomicRegionsAnnotate                  html  
    GenomicRegionsChrNumber                 html  
    GenomicRegionsComparison                html  
    GenomicRegionsCreateRegionsIds          html  
    GenomicRegionsFilter_neg                html  
    GenomicRegionsFilter_pos                html  
    GenomicRegionsFindOverlap               html  
    GenomicRegionsFromdataframe             html  
    GenomicRegionsFromfile                  html  
    GenomicRegionsNumber                    html  
    GenomicRegionsSpan                      html  
    GenomicRegionsTotalSpan                 html  
    MergeStatisticAnnotations2DataForPREDA
                                            html  
    PREDADataAndResults-class               html  
    PREDADataAndResults2dataframe           html  
    PREDAResults-class                      html  
    PREDAResults2GenomicRegions             html  
    PREDAResults2GenomicRegionsSingle       html  
    PREDAResults2PREDADataAndResults        html  
    PREDAResults2dataframe                  html  
    PREDAResultsGetObservedFlags            html  
    PREDA_main                              html  
    SODEGIR_GEstatistics                    html  
    finding level-2 HTML links ... done

    SODEGIRpreprocessingGE                  html  
    StatisticsForPREDA-class                html  
    StatisticsForPREDA2dataframe            html  
    StatisticsForPREDAFilterColumns_neg     html  
    StatisticsForPREDAFilterColumns_pos     html  
    StatisticsForPREDAFromdataframe         html  
    StatisticsForPREDAFromfile              html  
    analysesNames                           html  
    computeDatasetSignature                 html  
    eset2GenomicAnnotations                 html  
    genomePlot                              html  
    getStatisticByName                      html  
    preprocessingGE                         html  
    statisticsForPREDAfromEset              html  
** building package indices
** installing vignettes
   'PREDAclasses.Rnw' using 'latin1' 
   'PREDAtutorial.Rnw' using 'latin1' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PREDA)
Making 'packages.html' ... done