############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MSnID_1.26.0.tar.gz && rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MSnID_1.26.0.zip && rm MSnID_1.26.0.tar.gz MSnID_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 3 2620k 3 98k 0 0 518k 0 0:00:05 --:--:-- 0:00:05 517k 82 2620k 82 2163k 0 0 1827k 0 0:00:01 0:00:01 --:--:-- 1827k 100 2620k 100 2620k 0 0 1966k 0 0:00:01 0:00:01 --:--:-- 1967k install for i386 * installing *source* package 'MSnID' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MSnID' finding HTML links ... done MSnID-class html finding level-2 HTML links ... done MSnID-package html MSnIDFilter-class html accessions html add_mod_symbol html apply_filter html assess_missed_cleavages html assess_termini html correct_peak_selection html data html evaluate_filter html fetch_conversion_table html id_quality html infer_parsimonious_accessions html map_mod_sites html mass_measurement_error html optimize_filter html peptides html psms html read_mzIDs html recalibrate html remap_accessions-method html remap_fasta_entry_names html report_mods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'MSnID' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'MSnID' as MSnID_1.26.0.zip * DONE (MSnID) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'MSnID' successfully unpacked and MD5 sums checked