############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf MEDME.buildbin-libdir && mkdir MEDME.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MEDME.buildbin-libdir MEDME_1.52.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'MEDME' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c MEDMEweight.c -o MEDMEweight.o MEDMEweight.c: In function 'MEDMEweight': MEDMEweight.c:78:12: warning: 'weight' may be used uninitialized in this function [-Wmaybe-uninitialized] weightSum = weightSum + weight; ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ MEDMEweight.c:91:42: warning: 'Max' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] > Max) {AMSfinal[i] = Max;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:92:42: warning: 'Min' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] < Min) {AMSfinal[i] = Min;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:90:33: warning: 'E' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ MEDMEweight.c:90:47: warning: 'D' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~^~~~~~~ MEDMEweight.c:90:63: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~~~~^~~~ MEDMEweight.c:90:33: warning: 'B' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/MEDME.buildbin-libdir/00LOCK-MEDME/00new/MEDME/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MEDME' finding HTML links ... done CGcount html MEDME html MEDME.predict html MEDME.readFiles html MEDME.writeFiles html MEDMEset-class html smooth html testMEDMEset html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'MEDME' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c MEDMEweight.c -o MEDMEweight.o MEDMEweight.c: In function 'MEDMEweight': MEDMEweight.c:78:12: warning: 'weight' may be used uninitialized in this function [-Wmaybe-uninitialized] weightSum = weightSum + weight; ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ MEDMEweight.c:91:42: warning: 'Max' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] > Max) {AMSfinal[i] = Max;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:92:42: warning: 'Min' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] < Min) {AMSfinal[i] = Min;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:90:33: warning: 'E' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ MEDMEweight.c:90:47: warning: 'D' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~^~~~~~~ MEDMEweight.c:90:63: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~~~~^~~~ MEDMEweight.c:90:33: warning: 'B' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/MEDME.buildbin-libdir/MEDME/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'MEDME' as MEDME_1.52.0.zip * DONE (MEDME)