############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data HCAMatrixBrowser ### ############################################################################## ############################################################################## * checking for file ‘HCAMatrixBrowser/DESCRIPTION’ ... OK * preparing ‘HCAMatrixBrowser’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘HCAMatrix.Rmd’ using rmarkdown Loading required package: AnVIL Loading required package: dplyr Attaching package: 'dplyr' The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union Warning: Package 'HCAMatrixBrowser' is deprecated and will be removed from Bioconductor version 3.14 Attaching package: 'HCAMatrixBrowser' The following object is masked from 'package:dplyr': filter The following object is masked from 'package:stats': filter Quitting from lines 58-59 (HCAMatrix.Rmd) Error: processing vignette 'HCAMatrix.Rmd' failed with diagnostics: Could not resolve host: matrix.data.humancellatlas.org --- failed re-building ‘HCAMatrix.Rmd’ --- re-building ‘HCAMatrixBrowser.Rmd’ using rmarkdown Warning: Package 'HCABrowser' is deprecated and will be removed from Bioconductor version 3.14 Quitting from lines 102-103 (HCAMatrixBrowser.Rmd) Error: processing vignette 'HCAMatrixBrowser.Rmd' failed with diagnostics: Could not resolve host: matrix.data.humancellatlas.org --- failed re-building ‘HCAMatrixBrowser.Rmd’ SUMMARY: processing the following files failed: ‘HCAMatrix.Rmd’ ‘HCAMatrixBrowser.Rmd’ Error: Vignette re-building failed. Execution halted