Federico Marini
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/GeneTonic |
| git_branch: RELEASE_3_13 |
| git_last_commit: 32c4e77 |
| git_last_commit_date: 2021-06-04 17:41:55 -0400 (Fri, 04 Jun 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:06 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the GeneTonic package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneTonic.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 730/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GeneTonic 1.4.1 (landing page) Federico Marini
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: GeneTonic |
| Version: 1.4.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GeneTonic_1.4.1.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.4.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.4.1.zip && rm GeneTonic_1.4.1.tar.gz GeneTonic_1.4.1.zip |
| StartedAt: 2021-10-14 09:37:53 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:41:20 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 207.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GeneTonic_1.4.1.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.4.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.4.1.zip && rm GeneTonic_1.4.1.tar.gz GeneTonic_1.4.1.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1831k 100 1831k 0 0 3033k 0 --:--:-- --:--:-- --:--:-- 3037k
install for i386
* installing *source* package 'GeneTonic' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeneTonic'
finding HTML links ... done
GeneTonic-pkg html
GeneTonic html
GeneTonic_list html
check_colors html
checkup_GeneTonic html
checkup_gtl html
cluster_markov html
create_jaccard_matrix html
create_kappa_matrix html
describe_gtl html
deseqresult2df html
distill_enrichment html
dot-check_pandoc html
enhance_table html
enrichment_map html
enrichr_output_macrophage html
export_for_iSEE html
finding level-2 HTML links ... done
export_to_sif html
fgseaRes html
gene_plot html
geneinfo_2_html html
get_aggrscores html
get_expression_values html
ggs_backbone html
ggs_graph html
go_2_html html
gostres_macrophage html
gs_alluvial html
gs_dendro html
gs_fuzzyclustering html
gs_heatmap html
gs_horizon html
gs_mds html
gs_radar html
gs_scores html
gs_scoresheat html
gs_simplify html
gs_summary_heat html
gs_summary_overview html
gs_summary_overview_pair html
gs_volcano html
happy_hour html
map2color html
overlap_coefficient html
overlap_jaccard_index html
res_macrophage_IFNg_vs_naive html
shake_davidResult html
shake_enrichResult html
shake_enrichrResult html
shake_fgseaResult html
shake_gprofilerResult html
shake_topGOtableResult html
signature_volcano html
styleColorBar_divergent html
summarize_ggs_hubgenes html
topgoDE_macrophage_IFNg_vs_naive html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneTonic' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneTonic' as GeneTonic_1.4.1.zip
* DONE (GeneTonic)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'GeneTonic' successfully unpacked and MD5 sums checked