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This page was generated on 2021-10-15 15:05:41 -0400 (Fri, 15 Oct 2021).

INSTALL results for GeneSelectMMD on nebbiolo1

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneSelectMMD.git to
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raw results

Package 725/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneSelectMMD 2.36.0  (landing page)
Weiliang Qiu
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/GeneSelectMMD
git_branch: RELEASE_3_13
git_last_commit: c265d5d
git_last_commit_date: 2021-05-19 11:42:50 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: GeneSelectMMD
Version: 2.36.0
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL GeneSelectMMD
StartedAt: 2021-10-14 06:05:39 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 06:05:51 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 11.3 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL GeneSelectMMD
###
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* installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’
* installing *source* package ‘GeneSelectMMD’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c GeneSelectMMD_init.c -o GeneSelectMMD_init.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c Qfunc.f -o Qfunc.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c blas.f -o blas.o
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c isnan.c -o isnan.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c lbfgsb.f -o lbfgsb.o
lbfgsb.f:1409:0:

 1409 |      +                 tu,tl,wmc,wmp,wmw,ddot,tj,tj0,neggi,sbgnrm,
      | 
Warning: ‘tu’ may be used uninitialized in this function [-Wmaybe-uninitialized]
lbfgsb.f:1482:0:

 1482 |                t(nbreak) = tl/(-neggi)
      | 
Warning: ‘tl’ may be used uninitialized in this function [-Wmaybe-uninitialized]
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c lbfgsbDriver.f -o lbfgsbDriver.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c linpack.f -o linpack.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c llkhFun.f -o llkhFun.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c myTtest.f -o myTtest.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c paraEstLoop.f -o paraEstLoop.o
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c pt.c -o pt.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c timer.f -o timer.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -Wall -c wiFun.f -o wiFun.o
gcc -shared -L/home/biocbuild/bbs-3.13-bioc/R/lib -L/usr/local/lib -o GeneSelectMMD.so GeneSelectMMD_init.o Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.13-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.13-bioc/R/library/00LOCK-GeneSelectMMD/00new/GeneSelectMMD/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeneSelectMMD)