############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GeneOverlap_1.28.0.tar.gz && rm -rf GeneOverlap.buildbin-libdir && mkdir GeneOverlap.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneOverlap.buildbin-libdir GeneOverlap_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GeneOverlap_1.28.0.zip && rm GeneOverlap_1.28.0.tar.gz GeneOverlap_1.28.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 27 163k 27 45689 0 0 291k 0 --:--:-- --:--:-- --:--:-- 291k 100 163k 100 163k 0 0 720k 0 --:--:-- --:--:-- --:--:-- 719k install for i386 * installing *source* package 'GeneOverlap' ... ** using staged installation Warning in .write_description(db, file.path(outDir, "DESCRIPTION")) : Unknown encoding with non-ASCII data: converting to ASCII ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GeneOverlap' finding HTML links ... done GeneOverlap-package html GeneOverlap html GeneOverlapMatrix html drawHeatmap html getGenomeSize html getList html getReadonly html getReadonlyMatrix html gs.RNASeq html hESC.ChIPSeq.list html hESC.RNASeq.list html newGOM html newGeneOverlap html testGeneOverlap html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GeneOverlap' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GeneOverlap' as GeneOverlap_1.28.0.zip * DONE (GeneOverlap) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'GeneOverlap' successfully unpacked and MD5 sums checked