############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ChIPQC_1.28.0.tar.gz && rm -rf ChIPQC.buildbin-libdir && mkdir ChIPQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPQC.buildbin-libdir ChIPQC_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ChIPQC_1.28.0.zip && rm ChIPQC_1.28.0.tar.gz ChIPQC_1.28.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 14 1074k 14 154k 0 0 721k 0 0:00:01 --:--:-- 0:00:01 719k 100 1074k 100 1074k 0 0 1511k 0 --:--:-- --:--:-- --:--:-- 1511k install for i386 * installing *source* package 'ChIPQC' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ChIPQC' finding HTML links ... done ChIPQC-data html finding level-2 HTML links ... done ChIPQC-package html ChIPQC html ChIPQCexperiment-class html ChIPQCreport html ChIPQCsample-class html FragmentLengthCrossCoverage-methods html Normalisedaveragepeaksignal-methods html QCannotation-methods html QCcontrol-methods html QCdba-methods html QCmetadata-methods html QCmetrics-methods html QCsample-methods html ReadLengthCrossCoverage-methods html RelativeCrossCoverage-methods html averagepeaksignal-methods html coveragehistogram-methods html crosscoverage-methods html duplicateRate-methods html duplicates-methods html flagtagcounts-methods html fragmentlength-methods html frip-methods html mapped-methods html peaks-methods html plotCC-methods html plotCorHeatmap-methods html plotCoverageHist-methods html plotFribl-methods html plotFrip-methods html plotPeakProfile-methods html plotPrincomp-methods html plotRap-methods html plotRegi-methods html plotSSD-methods html readlength-methods html reads-methods html regi-methods html ribl-methods html rip-methods html ssd-methods html ** building package indices ** installing vignettes 'ChIPQC.Rnw' ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ChIPQC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ChIPQC' as ChIPQC_1.28.0.zip * DONE (ChIPQC) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'ChIPQC' successfully unpacked and MD5 sums checked