| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:00 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the CexoR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CexoR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 275/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Pedro Madrigal
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: CexoR |
| Version: 1.30.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CexoR_1.30.1.tar.gz && rm -rf CexoR.buildbin-libdir && mkdir CexoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CexoR.buildbin-libdir CexoR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CexoR_1.30.1.zip && rm CexoR_1.30.1.tar.gz CexoR_1.30.1.zip |
| StartedAt: 2021-10-14 10:30:58 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:32:06 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 68.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CexoR_1.30.1.tar.gz && rm -rf CexoR.buildbin-libdir && mkdir CexoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CexoR.buildbin-libdir CexoR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CexoR_1.30.1.zip && rm CexoR_1.30.1.tar.gz CexoR_1.30.1.zip
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install for i386
* installing *source* package 'CexoR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
** help
*** installing help indices
converting help for package 'CexoR'
finding HTML links ... done
CexoR-internal html
CexoR-package html
cexor html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/CexoR.buildbin-libdir/00LOCK-CexoR/00new/CexoR/help/cexor.html
plotcexor html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor
version 3.14
** testing if installed package can be loaded from final location
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor
version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CexoR' ...
** testing if installed package can be loaded
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor
version 3.14
* MD5 sums
packaged installation of 'CexoR' as CexoR_1.30.1.zip
* DONE (CexoR)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CexoR' successfully unpacked and MD5 sums checked