############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CRISPRseek_1.32.0.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.32.0.zip && rm CRISPRseek_1.32.0.tar.gz CRISPRseek_1.32.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 23 8246k 23 1915k 0 0 2397k 0 0:00:03 --:--:-- 0:00:03 2397k 75 8246k 75 6254k 0 0 3451k 0 0:00:02 0:00:01 0:00:01 3451k 100 8246k 100 8246k 0 0 3606k 0 0:00:02 0:00:02 --:--:-- 3607k install for i386 * installing *source* package 'CRISPRseek' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CRISPRseek' finding HTML links ... done CRISPRseek-package html annotateOffTargets html buildFeatureVectorForScoring html calculategRNAEfficiency html compare2Sequences html filterOffTarget html filtergRNA html findgRNAs html getOfftargetScore html isPatternUnique html offTargetAnalysis html offTargetAnalysisWithoutBSgenome html predictRelativeFreqIndels html searchHits html searchHits2 html translatePattern html uniqueREs html writeHits html writeHits2 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CRISPRseek' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CRISPRseek' as CRISPRseek_1.32.0.zip * DONE (CRISPRseek) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'CRISPRseek' successfully unpacked and MD5 sums checked