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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CNVRanger_1.8.0.tar.gz && rm -rf CNVRanger.buildbin-libdir && mkdir CNVRanger.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVRanger.buildbin-libdir CNVRanger_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CNVRanger_1.8.0.zip && rm CNVRanger_1.8.0.tar.gz CNVRanger_1.8.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 37  989k   37  375k    0     0  1112k      0 --:--:-- --:--:-- --:--:-- 1111k
100  989k  100  989k    0     0  1383k      0 --:--:-- --:--:-- --:--:-- 1382k

install for i386

* installing *source* package 'CNVRanger' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNVRanger'
    finding HTML links ... done
    cnvEQTL                                 html  
    finding level-2 HTML links ... done

    cnvGWAS                                 html  
    cnvOncoPrint                            html  
    generateGDS                             html  
    importLrrBaf                            html  
    plotEQTL                                html  
    plotManhattan                           html  
    plotRecurrentRegions                    html  
    populationRanges                        html  
    setupCnvGWAS                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CNVRanger' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNVRanger' as CNVRanger_1.8.0.zip
* DONE (CNVRanger)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CNVRanger' successfully unpacked and MD5 sums checked