############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BioNet_1.52.0.tar.gz && rm -rf BioNet.buildbin-libdir && mkdir BioNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioNet.buildbin-libdir BioNet_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BioNet_1.52.0.zip && rm BioNet_1.52.0.tar.gz BioNet_1.52.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 53 1022k 53 545k 0 0 1015k 0 0:00:01 --:--:-- 0:00:01 1016k 100 1022k 100 1022k 0 0 1267k 0 --:--:-- --:--:-- --:--:-- 1267k install for i386 * installing *source* package 'BioNet' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BioNet' finding HTML links ... done BioNet-package html aggrPvals html bumOptim html compareNetworks html consensusScores html fbum html fbumLL html fdrThreshold html fitBumModel html getCompScores html getEdgeList html hist.bum html largestComp html largestScoreComp html loadNetwork.sif html loadNetwork.tab html makeNetwork html mapByVar html permutateNodes html piUpper html plot.bum html plot3dModule html plotLLSurface html plotModule html print.bum html pvaluesExample html readHeinzGraph html readHeinzTree html resamplingPvalues html rmSelfLoops html runFastHeinz html runHeinz html save3dModule html saveNetwork html scanFDR html scoreFunction html scoreNodes html scoreOffset html sortedEdgeList html subNetwork html summary.bum html writeHeinz html writeHeinzEdges html writeHeinzNodes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'BioNet' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'BioNet' as BioNet_1.52.0.zip * DONE (BioNet) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'BioNet' successfully unpacked and MD5 sums checked