############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch BiSeq ### ############################################################################## ############################################################################## * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' * installing *source* package 'BiSeq' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BiSeq' finding HTML links ... done BSraw-class html finding level-2 HTML links ... done BSrel-class html DMRs html annotateGRanges html betaRegression html betaResults html betaResultsNull html binomLikelihoodSmooth html clusterSites html clusterSitesToGR html compareTwoSamples html covBoxplots html covStatistics html estLocCor html filterByCov html filterBySharedRegions html findDMRs html globalTest html limitCov html logisticRegression html makeVariogram html plotBindingSites html plotMeth html plotMethMap html plotSmoothMeth html predictMeth html predictedMeth html promoters html rawToRel html readBismark html rrbs html smoothVariogram html summarizeRegions html testClusters html trimClusters html vario html writeBED html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiSeq) Making 'packages.html' ... done