############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf BiGGR.buildbin-libdir && mkdir BiGGR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=BiGGR.buildbin-libdir BiGGR_1.28.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'BiGGR' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BiGGR' finding HTML links ... done BiGGR-internal html BiGGR-package html E.coli_iAF1260 html E.coli_iJR904 html E.coli_textbook html Glycolysis html H.pylori_ilT341 html H.sapiens_Recon1 html M.barkeri_iAF692 html M.tuberculosis_iNJ661 html P.putida_iJN746 html Recon2 html S.aureus_iSB619 html S.cerevisiae_iND750 html buildSBMLFromBiGG html buildSBMLFromGenes html finding level-2 HTML links ... done buildSBMLFromPathways html buildSBMLFromReactionIDs html createLIMFromBiGG html createLIMFromSBML html extractGeneAssociations html extractPathways html getPathwaysForSBML html getRates html gprMapping html gprMappingAvg html lying.tunell.data html rmvSpliceVariant html sampleFluxEnsemble html sbml2hyperdraw html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'BiGGR' as BiGGR_1.28.0.zip * DONE (BiGGR)