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### Running command:
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###   C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:AnnotationHubData.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings AnnotationHubData_1.22.0.tar.gz
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* using log directory 'C:/Users/biocbuild/bbs-3.13-bioc/meat/AnnotationHubData.Rcheck'
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'AnnotationHubData/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'AnnotationHubData' version '1.22.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'AnnotationHubData' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... WARNING
'::' or ':::' import not declared from: 'stringr'
Missing objects imported by ':::' calls:
  'AnnotationHub:::.db_connection'
  'GenomicFeatures:::.makeUCSCChrominfo'
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.NCBIMetadataFromUrl: no visible binding for global variable 'results'
.NCBIMetadataFromUrl: no visible binding for global variable 'specData'
.makeComplexGR: no visible binding for global variable 'seqname'
needToRerunNonStandardOrgDb: no visible binding for global variable
  'results'
needToRerunNonStandardOrgDb: no visible binding for global variable
  'specData'
trackWithAuxiliaryTablesToGRanges: no visible binding for global
  variable 'seqname'
Undefined global functions or variables:
  results seqname specData
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking include directives in Makefiles ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
validationFunctions 62.86   2.77   65.62
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
validationFunctions 69.72    1.6   71.33
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'AnnotationHubData_unit_tests.R'
 ERROR
Running the tests in 'tests/AnnotationHubData_unit_tests.R' failed.
Last 13 lines of output:
   
  1 Test Suite : 
  AnnotationHubData RUnit Tests - 24 test functions, 1 error, 0 failures
  ERROR in test_ftpDirectoryInfo: Error in function (type, msg, asError = TRUE)  : 
    Failed to connect to ftp.ebi.ac.uk port 21: Connection refused
  
  Test files with failing tests
  
     test_webAccessFunctions.R 
       test_ftpDirectoryInfo 
  
  
  Error in BiocGenerics:::testPackage("AnnotationHubData") : 
    unit tests failed for package AnnotationHubData
  Execution halted
** running tests for arch 'x64' ...
  Running 'AnnotationHubData_unit_tests.R'
 ERROR
Running the tests in 'tests/AnnotationHubData_unit_tests.R' failed.
Last 13 lines of output:
   
  1 Test Suite : 
  AnnotationHubData RUnit Tests - 24 test functions, 1 error, 0 failures
  ERROR in test_ftpDirectoryInfo: Error in function (type, msg, asError = TRUE)  : 
    Failed to connect to ftp.ebi.ac.uk port 21: Timed out
  
  Test files with failing tests
  
     test_webAccessFunctions.R 
       test_ftpDirectoryInfo 
  
  
  Error in BiocGenerics:::testPackage("AnnotationHubData") : 
    unit tests failed for package AnnotationHubData
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 ERRORs, 1 WARNING, 1 NOTE
See
  'C:/Users/biocbuild/bbs-3.13-bioc/meat/AnnotationHubData.Rcheck/00check.log'
for details.