| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:05:57 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the AffyExpress package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AffyExpress.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 28/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Xuejun Arthur Li
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: AffyExpress |
| Version: 1.58.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AffyExpress_1.58.0.tar.gz && rm -rf AffyExpress.buildbin-libdir && mkdir AffyExpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AffyExpress.buildbin-libdir AffyExpress_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AffyExpress_1.58.0.zip && rm AffyExpress_1.58.0.tar.gz AffyExpress_1.58.0.zip |
| StartedAt: 2021-10-14 07:52:22 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 07:53:18 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 55.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AffyExpress_1.58.0.tar.gz && rm -rf AffyExpress.buildbin-libdir && mkdir AffyExpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AffyExpress.buildbin-libdir AffyExpress_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AffyExpress_1.58.0.zip && rm AffyExpress_1.58.0.tar.gz AffyExpress_1.58.0.zip
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install for i386
* installing *source* package 'AffyExpress' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'AffyExpress'
finding HTML links ... done
AffyInteraction html
AffyQA html
AffyRegress html
Filter html
import.data html
interaction.result2html html
make.contrast html
make.design html
post.interaction html
pre.process html
regress html
result2html html
select.sig.gene html
testData html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'AffyExpress' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'AffyExpress' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'AffyExpress' ...
** testing if installed package can be loaded
Warning: Package 'AffyExpress' is deprecated and will be removed from
Bioconductor version 3.14
* MD5 sums
packaged installation of 'AffyExpress' as AffyExpress_1.58.0.zip
* DONE (AffyExpress)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'AffyExpress' successfully unpacked and MD5 sums checked