Back to Multiple platform build/check report for BioC 3.12
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

INSTALL report for treeio on tokay1

This page was generated on 2021-05-06 12:34:02 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the treeio package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1894/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
treeio 1.14.4  (landing page)
Guangchuang Yu
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/treeio
Branch: RELEASE_3_12
Last Commit: ac2277e
Last Changed Date: 2021-04-26 03:24:50 -0400 (Mon, 26 Apr 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: treeio
Version: 1.14.4
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/treeio_1.14.4.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.14.4.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL treeio_1.14.4.zip && rm treeio_1.14.4.tar.gz treeio_1.14.4.zip
StartedAt: 2021-05-05 17:12:52 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:14:04 -0400 (Wed, 05 May 2021)
EllapsedTime: 71.6 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/treeio_1.14.4.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.14.4.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL treeio_1.14.4.zip && rm treeio_1.14.4.tar.gz treeio_1.14.4.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  619k  100  619k    0     0  24.9M      0 --:--:-- --:--:-- --:--:-- 26.3M

install for i386

* installing *source* package 'treeio' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'treeio'
    finding HTML links ... done
    Nnode.treedata                          html  
    as.treedata                             html  
    beast-parser                            html  
    drop.tip-methods                        html  
    get-placements                          html  
    get.tree                                html  
    get.treetext-methods                    html  
    getNodeNum                              html  
    is.ggtree                               html  
    isTip                                   html  
    jplace-class                            html  
    label_branch_paml                       html  
    mask                                    html  
    merge_tree                              html  
    print.treedataList                      html  
    raxml2nwk                               html  
    read-jtree                              html  
    read.astral                             html  
    read.codeml                             html  
    read.codeml_mlc                         html  
    read.fasta                              html  
    read.hyphy                              html  
    read.hyphy.seq                          html  
    read.iqtree                             html  
    read.jplace                             html  
    read.mega_tabular                       html  
    read.newick                             html  
    read.nhx                                html  
    read.paml_rst                           html  
    read.phylip                             html  
    read.phylip.seq                         html  
    read.phylip.tree                        html  
    read.phyloxml                           html  
    read.r8s                                html  
    read.raxml                              html  
    read.treeqza                            html  
    reexports                               html  
    rename_taxa                             html  
    rescale_tree                            html  
    root-method                             html  
    tree_subset                             html  
    write-jtree                             html  
    write.beast                             html  
    write.beast.newick                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'treeio' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'treeio' as treeio_1.14.4.zip
* DONE (treeio)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'treeio' successfully unpacked and MD5 sums checked