Back to Multiple platform build/check report for BioC 3.12
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

INSTALL report for tradeSeq on tokay1

This page was generated on 2021-05-06 12:34:01 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the tradeSeq package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1885/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tradeSeq 1.4.0  (landing page)
Hector Roux de Bezieux
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/tradeSeq
Branch: RELEASE_3_12
Last Commit: 867b90c
Last Changed Date: 2020-10-27 11:51:33 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    TIMEOUT    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: tradeSeq
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/tradeSeq_1.4.0.tar.gz && rm -rf tradeSeq.buildbin-libdir && mkdir tradeSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=tradeSeq.buildbin-libdir tradeSeq_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL tradeSeq_1.4.0.zip && rm tradeSeq_1.4.0.tar.gz tradeSeq_1.4.0.zip
StartedAt: 2021-05-05 18:37:23 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:38:22 -0400 (Wed, 05 May 2021)
EllapsedTime: 58.9 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/tradeSeq_1.4.0.tar.gz && rm -rf tradeSeq.buildbin-libdir && mkdir tradeSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=tradeSeq.buildbin-libdir tradeSeq_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL tradeSeq_1.4.0.zip && rm tradeSeq_1.4.0.tar.gz tradeSeq_1.4.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1333k  100 1333k    0     0  35.1M      0 --:--:-- --:--:-- --:--:-- 36.1M

install for i386

* installing *source* package 'tradeSeq' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'tradeSeq'
    finding HTML links ... done
    associationTest                         html  
    celltype                                html  
    clusterExpressionPatterns               html  
    conditionTest                           html  
    countMatrix                             html  
    crv                                     html  
    diffEndTest                             html  
    earlyDETest                             html  
    evaluateK                               html  
    extract_monocle_info                    html  
    fitGAM                                  html  
    gamList                                 html  
    getSmootherPvalues                      html  
    getSmootherTestStats                    html  
    nknots                                  html  
    patternTest                             html  
    plotGeneCount                           html  
    finding level-2 HTML links ... done

    plotSmoothers                           html  
    predictCells                            html  
    predictSmooth                           html  
    sds                                     html  
    startVsEndTest                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'tradeSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'tradeSeq' as tradeSeq_1.4.0.zip
* DONE (tradeSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'tradeSeq' successfully unpacked and MD5 sums checked