Diego Diez
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/rTRM |
| Branch: RELEASE_3_12 |
| Last Commit: 2908ebc |
| Last Changed Date: 2020-10-27 10:51:24 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:23 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the rTRM package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1600/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rTRM 1.28.0 (landing page) Diego Diez
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: rTRM |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/rTRM_1.28.0.tar.gz && rm -rf rTRM.buildbin-libdir && mkdir rTRM.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rTRM.buildbin-libdir rTRM_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL rTRM_1.28.0.zip && rm rTRM_1.28.0.tar.gz rTRM_1.28.0.zip |
| StartedAt: 2021-05-05 17:15:00 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:15:46 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 46.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/rTRM_1.28.0.tar.gz && rm -rf rTRM.buildbin-libdir && mkdir rTRM.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rTRM.buildbin-libdir rTRM_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL rTRM_1.28.0.zip && rm rTRM_1.28.0.tar.gz rTRM_1.28.0.zip
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install for i386
* installing *source* package 'rTRM' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
Loading required package: igraph
Attaching package: 'igraph'
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
*** installing help indices
converting help for package 'rTRM'
finding HTML links ... done
annotateFreq html
annotateModule html
annotateTRM html
biogrid_hs html
biogrid_mm html
findTRM html
getAnnotations html
getBiogridData html
getConcentricList html
getLargestComp html
getMaps html
getMatrices html
getMotifsFromEntrezgene html
getMotifsFromSymbol html
getOrthologFromMatrix html
getOrthologs html
getOrthologsFromBiomart html
getSequencesFromGenome html
getSimilarityMatrix html
getTFclass html
getTFclassFromEntrezgene html
getTFterms html
initBiomart html
layout.arc html
layout.concentric html
plotDegree html
plotGraph html
plotTRM html
plotTRMlegend html
processBiogrid html
rTRM-package html
removeVertices html
writeTRMreport html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'rTRM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rTRM' as rTRM_1.28.0.zip
* DONE (rTRM)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'rTRM' successfully unpacked and MD5 sums checked