Back to Multiple platform build/check report for BioC 3.12
ABCDEFGHIJKLMNOP[Q]RSTUVWXYZ

INSTALL report for quantsmooth on tokay1

This page was generated on 2021-02-22 12:40:04 -0500 (Mon, 22 Feb 2021).

To the developers/maintainers of the quantsmooth package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1434/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
quantsmooth 1.56.0
Jan Oosting
Snapshot Date: 2021-02-21 14:52:07 -0500 (Sun, 21 Feb 2021)
URL: https://git.bioconductor.org/packages/quantsmooth
Branch: RELEASE_3_12
Last Commit: 6635ed8
Last Changed Date: 2020-10-27 10:29:04 -0500 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: quantsmooth
Version: 1.56.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/quantsmooth_1.56.0.tar.gz && rm -rf quantsmooth.buildbin-libdir && mkdir quantsmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=quantsmooth.buildbin-libdir quantsmooth_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL quantsmooth_1.56.0.zip && rm quantsmooth_1.56.0.tar.gz quantsmooth_1.56.0.zip
StartedAt: 2021-02-21 17:00:12 -0500 (Sun, 21 Feb 2021)
EndedAt: 2021-02-21 17:00:52 -0500 (Sun, 21 Feb 2021)
EllapsedTime: 40.0 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/quantsmooth_1.56.0.tar.gz && rm -rf quantsmooth.buildbin-libdir && mkdir quantsmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=quantsmooth.buildbin-libdir quantsmooth_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL quantsmooth_1.56.0.zip && rm quantsmooth_1.56.0.tar.gz quantsmooth_1.56.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  106k  100  106k    0     0  2230k      0 --:--:-- --:--:-- --:--:-- 2418k

install for i386

* installing *source* package 'quantsmooth' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'quantsmooth'
    finding HTML links ... done
    Chromosome14                            html  
    chrom.bands                             html  
    drawSimpleChrom                         html  
    getChangedIdx                           html  
    getChangedRegions                       html  
    getLambdaMin                            html  
    grid.chromosome                         html  
    lengthChromosome                        html  
    numericCHR                              html  
    paintCytobands                          html  
    plotChromosome                          html  
    plotSmoothed                            html  
    position2Cytoband                       html  
    prepareGenomePlot                       html  
    quantsmooth                             html  
    quantsmooth.cv                          html  
    quantsmooth.seg                         html  
    scaleto                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'quantsmooth' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'quantsmooth' as quantsmooth_1.56.0.zip
* DONE (quantsmooth)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'quantsmooth' successfully unpacked and MD5 sums checked