Back to Multiple platform build/check report for BioC 3.12
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

INSTALL report for normr on malbec1

This page was generated on 2021-05-06 12:28:25 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the normr package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1234/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
normr 1.16.0  (landing page)
Johannes Helmuth
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/normr
Branch: RELEASE_3_12
Last Commit: d829918
Last Changed Date: 2020-10-27 11:15:37 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: normr
Version: 1.16.0
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL normr
StartedAt: 2021-05-05 16:46:44 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 16:47:34 -0400 (Wed, 05 May 2021)
EllapsedTime: 50.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL normr
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘normr’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -fopenmp -D_GLIBCXX_USE_C99 -I'/home/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -fopenmp -D_GLIBCXX_USE_C99 -I'/home/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c em.cpp -o em.o
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -fopenmp -D_GLIBCXX_USE_C99 -I'/home/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c normr_init.c -o normr_init.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o normr.so RcppExports.o em.o normr_init.o -fopenmp -D_GLIBCXX_USE_C99 -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-normr/00new/normr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘getClasses’ in package ‘normr’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (normr)