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BUILD BIN report for metaseqR2 on tokay1

This page was generated on 2021-05-06 12:32:12 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the metaseqR2 package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1060/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metaseqR2 1.2.0  (landing page)
Panagiotis Moulos
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/metaseqR2
Branch: RELEASE_3_12
Last Commit: 2bcc067
Last Changed Date: 2020-10-27 11:57:00 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: metaseqR2
Version: 1.2.0
Command: rm -rf metaseqR2.buildbin-libdir && mkdir metaseqR2.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metaseqR2.buildbin-libdir metaseqR2_1.2.0.tar.gz
StartedAt: 2021-05-06 09:29:41 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:31:33 -0400 (Thu, 06 May 2021)
EllapsedTime: 112.1 seconds
RetCode: 0
Status:   OK   
PackageFile: metaseqR2_1.2.0.zip
PackageFileSize: 4.363 MiB

Command output

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### Running command:
###
###   rm -rf metaseqR2.buildbin-libdir && mkdir metaseqR2.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metaseqR2.buildbin-libdir metaseqR2_1.2.0.tar.gz
###
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install for i386

* installing *source* package 'metaseqR2' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
    double esttotalperlength = total/2;
           ^~~~~~~~~~~~~~~~~
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o metaseqR2.dll tmp.def pval.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/metaseqR2.buildbin-libdir/00LOCK-metaseqR2/00new/metaseqR2/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'metaseqR2'
    finding HTML links ... done
    buildAnnotationDatabase                 html  
    buildCustomAnnotation                   html  
    combineBonferroni                       html  
    combineHarmonic                         html  
    combineMaxp                             html  
    combineMinp                             html  
    combineSimes                            html  
    combineWeight                           html  
    createSignalTracks                      html  
    diagplotAvgFtd                          html  
    diagplotBoxplot                         html  
    diagplotCor                             html  
    diagplotDeHeatmap                       html  
    diagplotEdaseq                          html  
    diagplotFiltered                        html  
    diagplotFtd                             html  
    diagplotMds                             html  
    diagplotNoiseq                          html  
    diagplotPairs                           html  
    diagplotRoc                             html  
    diagplotVenn                            html  
    diagplotVolcano                         html  
    downsampleCounts                        html  
    estimateAufcWeights                     html  
    estimateSimParams                       html  
    getAnnotation                           html  
    getDefaults                             html  
    getInstalledAnnotations                 html  
    getWeights                              html  
    hg19pvalues                             html  
    importCustomAnnotation                  html  
    libsizeListMm9                          html  
    loadAnnotation                          html  
    makeSimDataSd                           html  
    makeSimDataTcc                          html  
    metaTest                                html  
    metaseqr2                               html  
    finding level-2 HTML links ... done

    metaseqrPlot                            html  
    mm9GeneCounts                           html  
    normalizeAbsseq                         html  
    normalizeDeseq                          html  
    normalizeDeseq2                         html  
    normalizeDss                            html  
    normalizeEdaseq                         html  
    normalizeEdger                          html  
    normalizeNbpseq                         html  
    normalizeNoiseq                         html  
    read2count                              html  
    readTargets                             html  
    sampleListMm9                           html  
    statAbsseq                              html  
    statBayseq                              html  
    statDeseq                               html  
    statDeseq2                              html  
    statDss                                 html  
    statEdger                               html  
    statLimma                               html  
    statNbpseq                              html  
    statNoiseq                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'metaseqR2' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
    double esttotalperlength = total/2;
           ^~~~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o metaseqR2.dll tmp.def pval.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/metaseqR2.buildbin-libdir/metaseqR2/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'metaseqR2' as metaseqR2_1.2.0.zip
* DONE (metaseqR2)