Back to Multiple platform build/check report for BioC 3.12
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

INSTALL report for glmSparseNet on tokay1

This page was generated on 2021-05-06 12:31:30 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the glmSparseNet package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 749/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
glmSparseNet 1.8.1  (landing page)
André Veríssimo
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/glmSparseNet
Branch: RELEASE_3_12
Last Commit: 90162a3
Last Changed Date: 2021-04-13 13:13:39 -0400 (Tue, 13 Apr 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: glmSparseNet
Version: 1.8.1
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/glmSparseNet_1.8.1.tar.gz && rm -rf glmSparseNet.buildbin-libdir && mkdir glmSparseNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=glmSparseNet.buildbin-libdir glmSparseNet_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL glmSparseNet_1.8.1.zip && rm glmSparseNet_1.8.1.tar.gz glmSparseNet_1.8.1.zip
StartedAt: 2021-05-05 19:09:17 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:10:25 -0400 (Wed, 05 May 2021)
EllapsedTime: 67.4 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/glmSparseNet_1.8.1.tar.gz && rm -rf glmSparseNet.buildbin-libdir && mkdir glmSparseNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=glmSparseNet.buildbin-libdir glmSparseNet_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL glmSparseNet_1.8.1.zip && rm glmSparseNet_1.8.1.tar.gz glmSparseNet_1.8.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  738k  100  738k    0     0  31.2M      0 --:--:-- --:--:-- --:--:-- 32.8M

install for i386

* installing *source* package 'glmSparseNet' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'glmSparseNet'
    finding HTML links ... done
    buildLambda                             html  
    buildStringNetwork                      html  
    cv.glmDegree                            html  
    cv.glmHub                               html  
    cv.glmOrphan                            html  
    cv.glmSparseNet                         html  
    degreeCor                               html  
    degreeCov                               html  
    degreeSparsebn                          html  
    dot-calcPenalty                         html  
    dot-degreeGeneric                       html  
    dot-glmSparseNetPrivate                 html  
    dot-networkGenericParallel              html  
    dot-networkWorker                       html  
    ensemblGeneNames                        html  
    geneNames                               html  
    glmDegree                               html  
    glmHub                                  html  
    glmOrphan                               html  
    glmSparseNet                            html  
    hallmarks                               html  
    heuristicScale                          html  
    hubHeuristic                            html  
    networkCorParallel                      html  
    networkCovParallel                      html  
    networkOptions                          html  
    orphanHeuristic                         html  
    protein2EnsemblGeneNames                html  
    separate2GroupsCox                      html  
    string.network.700.cache                html  
    stringDBhomoSapiens                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'glmSparseNet' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'glmSparseNet' as glmSparseNet_1.8.1.zip
* DONE (glmSparseNet)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'glmSparseNet' successfully unpacked and MD5 sums checked