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INSTALL report for gaga on malbec1

This page was generated on 2021-05-06 12:27:39 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the gaga package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 658/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gaga 2.36.0  (landing page)
David Rossell
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/gaga
Branch: RELEASE_3_12
Last Commit: a81789d
Last Changed Date: 2020-10-27 10:32:35 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: gaga
Version: 2.36.0
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL gaga
StartedAt: 2021-05-05 16:07:44 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 16:07:57 -0400 (Wed, 05 May 2021)
EllapsedTime: 13.1 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL gaga
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* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘gaga’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c cseqdesma.c -o cseqdesma.o
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c cstat.c -o cstat.o
cstat.c:22:19: warning: ‘css_c_sccs_id’ defined but not used [-Wunused-const-variable=]
 static const char css_c_sccs_id[] = "@(#)$Workfile: rand.c$ $Revision: 5$";
                   ^~~~~~~~~~~~~
cstat.c:21:19: warning: ‘vector_c_sccs_id’ defined but not used [-Wunused-const-variable=]
 static const char vector_c_sccs_id[] = "%W%";
                   ^~~~~~~~~~~~~~~~
cstat.c:20:19: warning: ‘nrutil_c_sccs_id’ defined but not used [-Wunused-const-variable=]
 static const char nrutil_c_sccs_id[] = "%W%";
                   ^~~~~~~~~~~~~~~~
cstat.c:19:19: warning: ‘mess_c_sccs_id’ defined but not used [-Wunused-const-variable=]
 static const char mess_c_sccs_id[] = "%W%";
                   ^~~~~~~~~~~~~~
cstat.c:18:19: warning: ‘interface_c_sccs_id’ defined but not used [-Wunused-const-variable=]
 static const char interface_c_sccs_id[] = "%W%";
                   ^~~~~~~~~~~~~~~~~~~
gcc -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o gaga.so cseqdesma.o cstat.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-gaga/00new/gaga/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gaga)