Back to Multiple platform build/check report for BioC 3.12
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for coRdon on tokay1

This page was generated on 2021-05-06 12:30:29 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the coRdon package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 376/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
coRdon 1.8.0  (landing page)
Anamaria Elek
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/coRdon
Branch: RELEASE_3_12
Last Commit: 4209a51
Last Changed Date: 2020-10-27 11:37:26 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: coRdon
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/coRdon_1.8.0.tar.gz && rm -rf coRdon.buildbin-libdir && mkdir coRdon.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=coRdon.buildbin-libdir coRdon_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL coRdon_1.8.0.zip && rm coRdon_1.8.0.tar.gz coRdon_1.8.0.zip
StartedAt: 2021-05-05 17:21:47 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:22:47 -0400 (Wed, 05 May 2021)
EllapsedTime: 59.7 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/coRdon_1.8.0.tar.gz && rm -rf coRdon.buildbin-libdir && mkdir coRdon.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=coRdon.buildbin-libdir coRdon_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL coRdon_1.8.0.zip && rm coRdon_1.8.0.tar.gz coRdon_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  319k  100  319k    0     0   829k      0 --:--:-- --:--:-- --:--:--  831k

install for i386

* installing *source* package 'coRdon' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'coRdon'
    finding HTML links ... done
    HD59                                    html  
    HD59_KO                                 html  
    HD59_PATHWAYS                           html  
    LD94                                    html  
    LD94_KO                                 html  
    LD94_PATHWAYS                           html  
    RPKOs                                   html  
    bplot                                   html  
    coRdon                                  html  
    codonTable-class                        html  
    codonUsage-expressivity                 html  
    codonUsage                              html  
    crossTab-class                          html  
    enrichBarplot                           html  
    enrichMAplot                            html  
    enrichMatrix                            html  
    enrichment                              html  
    genCode-class                           html  
    intraBplot                              html  
    length-codonTable                       html  
    length-crossTab                         html  
    readSet                                 html  
    reduceCrossTab                          html  
    show-codonTable                         html  
    show-crossTab                           html  
    subset                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'coRdon' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'coRdon' as coRdon_1.8.0.zip
* DONE (coRdon)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'coRdon' successfully unpacked and MD5 sums checked