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INSTALL report for baySeq on tokay1

This page was generated on 2020-08-06 11:52:06 -0400 (Thu, 06 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE baySeq PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 120/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
baySeq 2.23.0
Thomas J. Hardcastle
Snapshot Date: 2020-08-05 14:50:59 -0400 (Wed, 05 Aug 2020)
URL: https://git.bioconductor.org/packages/baySeq
Branch: master
Last Commit: 2ea28df
Last Changed Date: 2020-04-27 14:20:16 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: baySeq
Version: 2.23.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/baySeq_2.23.0.tar.gz && rm -rf baySeq.buildbin-libdir && mkdir baySeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=baySeq.buildbin-libdir baySeq_2.23.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL baySeq_2.23.0.zip && rm baySeq_2.23.0.tar.gz baySeq_2.23.0.zip
StartedAt: 2020-08-05 17:31:10 -0400 (Wed, 05 Aug 2020)
EndedAt: 2020-08-05 17:32:03 -0400 (Wed, 05 Aug 2020)
EllapsedTime: 52.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/baySeq_2.23.0.tar.gz && rm -rf baySeq.buildbin-libdir && mkdir baySeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=baySeq.buildbin-libdir baySeq_2.23.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL baySeq_2.23.0.zip && rm baySeq_2.23.0.tar.gz baySeq_2.23.0.zip
###
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install for i386

* installing *source* package 'baySeq' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'baySeq'
    finding HTML links ... done
    CDPost                                  html  
    CDPriors                                html  
    allModels                               html  
    baySeq-classes                          html  
    baySeq-package                          html  
    bimodalSep                              html  
    densityFunction                         html  
    densityFunctions                        html  
    getLibsizes                             html  
    getLikelihoods                          html  
    getPosteriors                           html  
    getPriors                               html  
    getTPs                                  html  
    makeOrderings                           html  
    marginaliseEqual                        html  
    marginalisePairwise                     html  
    methObservables                         html  
    mobAnnotation                           html  
    mobData                                 html  
    pairData                                html  
    plotMA.CD                               html  
    plotNullPrior                           html  
    plotPosteriors                          html  
    plotPriors                              html  
    selectTop                               html  
    simData                                 html  
    summarisePosteriors                     html  
    topCounts                               html  
    zimData                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'baySeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'baySeq' as baySeq_2.23.0.zip
* DONE (baySeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'baySeq' successfully unpacked and MD5 sums checked