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INSTALL report for annotationTools on tokay1

This page was generated on 2020-08-06 11:50:32 -0400 (Thu, 06 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE annotationTools PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 64/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
annotationTools 1.63.0
Alexandre Kuhn
Snapshot Date: 2020-08-05 14:50:59 -0400 (Wed, 05 Aug 2020)
URL: https://git.bioconductor.org/packages/annotationTools
Branch: master
Last Commit: 0a25929
Last Changed Date: 2020-04-27 14:14:46 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: annotationTools
Version: 1.63.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/annotationTools_1.63.0.tar.gz && rm -rf annotationTools.buildbin-libdir && mkdir annotationTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotationTools.buildbin-libdir annotationTools_1.63.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL annotationTools_1.63.0.zip && rm annotationTools_1.63.0.tar.gz annotationTools_1.63.0.zip
StartedAt: 2020-08-05 16:45:57 -0400 (Wed, 05 Aug 2020)
EndedAt: 2020-08-05 16:46:38 -0400 (Wed, 05 Aug 2020)
EllapsedTime: 41.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/annotationTools_1.63.0.tar.gz && rm -rf annotationTools.buildbin-libdir && mkdir annotationTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotationTools.buildbin-libdir annotationTools_1.63.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL annotationTools_1.63.0.zip && rm annotationTools_1.63.0.tar.gz annotationTools_1.63.0.zip
###
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100  123k  100  123k    0     0  3502k      0 --:--:-- --:--:-- --:--:-- 3860k

install for i386

* installing *source* package 'annotationTools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'annotationTools'
    finding HTML links ... done
    HG-U133_Plus_2_annot_part               html  
    HG-U133_Plus_2_ortholog_part            html  
    Mouse430_2_annot_part                   html  
    annot_HGU133A                           html  
    compactList                             html  
    gene_orthologs_part                     html  
    getANNOTATION                           html  
    getGENEID                               html  
    getGENEONTOLOGY                         html  
    getGENESYMBOL                           html  
    getGENETITLE                            html  
    getHOMOLOG                              html  
    getMULTIANNOTATION                      html  
    getOrthologousProbesets                 html  
    getPROBESET                             html  
    homologene_part                         html  
    listToCharacterVector                   html  
    ortho                                   html  
    ps2ps                                   html  
    table_human                             html  
    table_mouse                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'annotationTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'annotationTools' as annotationTools_1.63.0.zip
* DONE (annotationTools)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'annotationTools' successfully unpacked and MD5 sums checked