Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-01-23 11:54:44 -0500 (Sat, 23 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE a4Classif PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 3/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
a4Classif 1.38.0 Laure Cougnaud
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
nebbiolo1 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | ![]() | ||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | [ OK ] | OK | ![]() |
Package: a4Classif |
Version: 1.38.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:a4Classif.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings a4Classif_1.38.0.tar.gz |
StartedAt: 2021-01-22 23:01:14 -0500 (Fri, 22 Jan 2021) |
EndedAt: 2021-01-22 23:02:58 -0500 (Fri, 22 Jan 2021) |
EllapsedTime: 103.1 seconds |
RetCode: 0 |
Status: OK |
CheckDir: a4Classif.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:a4Classif.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings a4Classif_1.38.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.12-bioc/meat/a4Classif.Rcheck’ * using R version 4.0.3 (2020-10-10) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘a4Classif/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘a4Classif’ version ‘1.38.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘a4Classif’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... NOTE Package in Depends field not imported from: ‘a4Preproc’ These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed rfClass 8.294 0.098 8.404 pamClass 7.263 0.580 7.855 lassoClass 7.542 0.259 7.813 * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.12-bioc/meat/a4Classif.Rcheck/00check.log’ for details.
a4Classif.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL a4Classif ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library’ * installing *source* package ‘a4Classif’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (a4Classif)
a4Classif.Rcheck/a4Classif-Ex.timings
name | user | system | elapsed | |
ROCcurve | 0.183 | 0.004 | 0.187 | |
lassoClass | 7.542 | 0.259 | 7.813 | |
pamClass | 7.263 | 0.580 | 7.855 | |
rfClass | 8.294 | 0.098 | 8.404 | |