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INSTALL report for TileDBArray on tokay1

This page was generated on 2021-05-06 12:33:58 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the TileDBArray package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1859/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TileDBArray 1.0.0  (landing page)
Aaron Lun
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/TileDBArray
Branch: RELEASE_3_12
Last Commit: 37c4641
Last Changed Date: 2020-10-27 12:01:12 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: TileDBArray
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/TileDBArray_1.0.0.tar.gz && rm -rf TileDBArray.buildbin-libdir && mkdir TileDBArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TileDBArray.buildbin-libdir TileDBArray_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL TileDBArray_1.0.0.zip && rm TileDBArray_1.0.0.tar.gz TileDBArray_1.0.0.zip
StartedAt: 2021-05-05 17:39:10 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:41:43 -0400 (Wed, 05 May 2021)
EllapsedTime: 153.1 seconds
RetCode: 0
Status:   OK   

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/TileDBArray_1.0.0.tar.gz && rm -rf TileDBArray.buildbin-libdir && mkdir TileDBArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TileDBArray.buildbin-libdir TileDBArray_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL TileDBArray_1.0.0.zip && rm TileDBArray_1.0.0.tar.gz TileDBArray_1.0.0.zip
###
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install for i386

* installing *source* package 'TileDBArray' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c remap_indices.cpp -o remap_indices.o
remap_indices.cpp: In function 'Rcpp::List remap_indices(Rcpp::List, Rcpp::List)':
remap_indices.cpp:7:16: warning: comparison of integer expressions of different signedness: 'const size_t' {aka 'const unsigned int'} and 'R_xlen_t' {aka 'int'} [-Wsign-compare]
     if (n_dims != remapping.size()) {
         ~~~~~~~^~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o TileDBArray.dll tmp.def RcppExports.o remap_indices.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/TileDBArray.buildbin-libdir/00LOCK-TileDBArray/00new/TileDBArray/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TileDBArray'
    finding HTML links ... done
    TileDBArray-globals                     html  
    finding level-2 HTML links ... done

    TileDBArray-pkg                         html  
    TileDBArray                             html  
    TileDBRealizationSink                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TileDBArray' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c remap_indices.cpp -o remap_indices.o
remap_indices.cpp: In function 'Rcpp::List remap_indices(Rcpp::List, Rcpp::List)':
remap_indices.cpp:7:16: warning: comparison of integer expressions of different signedness: 'const size_t' {aka 'const long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
     if (n_dims != remapping.size()) {
         ~~~~~~~^~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o TileDBArray.dll tmp.def RcppExports.o remap_indices.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/TileDBArray.buildbin-libdir/TileDBArray/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TileDBArray' as TileDBArray_1.0.0.zip
* DONE (TileDBArray)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'TileDBArray' successfully unpacked and MD5 sums checked