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INSTALL report for TNBC.CMS on tokay1

This page was generated on 2021-05-06 12:33:59 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the TNBC.CMS package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1871/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TNBC.CMS 1.6.0  (landing page)
Doyeong Yu
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/TNBC.CMS
Branch: RELEASE_3_12
Last Commit: ed9230e
Last Changed Date: 2020-10-27 11:44:28 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: TNBC.CMS
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/TNBC.CMS_1.6.0.tar.gz && rm -rf TNBC.CMS.buildbin-libdir && mkdir TNBC.CMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TNBC.CMS.buildbin-libdir TNBC.CMS_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL TNBC.CMS_1.6.0.zip && rm TNBC.CMS_1.6.0.tar.gz TNBC.CMS_1.6.0.zip
StartedAt: 2021-05-05 19:07:52 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:08:40 -0400 (Wed, 05 May 2021)
EllapsedTime: 48.8 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/TNBC.CMS_1.6.0.tar.gz && rm -rf TNBC.CMS.buildbin-libdir && mkdir TNBC.CMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TNBC.CMS.buildbin-libdir TNBC.CMS_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL TNBC.CMS_1.6.0.zip && rm TNBC.CMS_1.6.0.tar.gz TNBC.CMS_1.6.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2725k  100 2725k    0     0  54.6M      0 --:--:-- --:--:-- --:--:-- 55.4M

install for i386

* installing *source* package 'TNBC.CMS' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TNBC.CMS'
    finding HTML links ... done
    GSE25055                                html  
    computeDS                               html  
    computeESTIMATEscore                    html  
    computeGES                              html  
    computexCellScore                       html  
    performGSVA                             html  
    plotHR                                  html  
    plotKM                                  html  
    predictCMS                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TNBC.CMS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TNBC.CMS' as TNBC.CMS_1.6.0.zip
* DONE (TNBC.CMS)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'TNBC.CMS' successfully unpacked and MD5 sums checked