Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:33:56 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the TCGAutils package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1844/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
TCGAutils 1.10.1 (landing page) Marcel Ramos
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: TCGAutils |
Version: 1.10.1 |
Command: rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAutils.buildbin-libdir TCGAutils_1.10.1.tar.gz |
StartedAt: 2021-05-06 10:15:16 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 10:16:39 -0400 (Thu, 06 May 2021) |
EllapsedTime: 83.0 seconds |
RetCode: 0 |
Status: OK |
PackageFile: TCGAutils_1.10.1.zip |
PackageFileSize: 474.1 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAutils.buildbin-libdir TCGAutils_1.10.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'TCGAutils' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TCGAutils' finding HTML links ... done ID-translation html TCGAbarcode html TCGAbiospec html TCGAprimaryTumors html finding level-2 HTML links ... done TCGAsampleSelect html TCGAutils-package html builds html clinicalNames html curatedTCGAData-helpers html diseaseCodes html findGRangesCols html generateMap html getFileName html hidden-helpers html imputeAssay html makeGRangesListFromCopyNumber html makeGRangesListFromExonFiles html makeSummarizedExperimentFromGISTIC html mergeColData html oncoPrintTCGA html sampleTypes html simplifyTCGA html trimColData html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TCGAutils' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'TCGAutils' as TCGAutils_1.10.1.zip * DONE (TCGAutils)