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BUILD BIN report for InterMineR on merida1

This page was generated on 2021-05-06 12:35:23 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the InterMineR package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 905/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
InterMineR 1.12.3  (landing page)
InterMine Team
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/InterMineR
Branch: RELEASE_3_12
Last Commit: ecd9a83
Last Changed Date: 2021-04-28 05:11:58 -0400 (Wed, 28 Apr 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: InterMineR
Version: 1.12.3
Command: rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.12.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R InterMineR.buildbin-libdir
StartedAt: 2021-05-06 08:59:33 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:00:30 -0400 (Thu, 06 May 2021)
EllapsedTime: 56.9 seconds
RetCode: 0
Status:   OK  
PackageFile: InterMineR_1.12.3.tgz
PackageFileSize: 754 KiB

Command output

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###
### Running command:
###
###   rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.12.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R InterMineR.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=InterMineR.buildbin-libdir InterMineR_1.12.3.tar.gz'
>>>>>>> 

* installing *source* package ‘InterMineR’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘intersect’ in package ‘InterMineR’
Creating a new generic function for ‘union’ in package ‘InterMineR’
** help
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:41: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:42: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:50: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:51: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:59: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:60: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:63: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:66: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:69: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:72: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:80: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:81: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:84: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:87: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:90: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:98: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:99: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:102: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:105: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:108: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:116: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:117: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:120: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:123: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:126: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:134: unexpected section header '\arguments'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:135: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:138: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:141: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:144: unknown macro '\item'
Warning: /private/tmp/Rtmp2QqQ7k/R.INSTALL17c92a1b72a4/InterMineR/man/ListManager-methods.Rd:147: unknown macro '\item'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package keeps a record of temporary installation path
* DONE (InterMineR)