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INSTALL report for ImpulseDE2 on tokay1

This page was generated on 2021-05-06 12:31:50 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the ImpulseDE2 package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 890/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ImpulseDE2 1.14.0  (landing page)
David S Fischer
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/ImpulseDE2
Branch: RELEASE_3_12
Last Commit: c2f4775
Last Changed Date: 2020-10-27 11:23:35 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    ERROR  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: ImpulseDE2
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/ImpulseDE2_1.14.0.tar.gz && rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ImpulseDE2_1.14.0.zip && rm ImpulseDE2_1.14.0.tar.gz ImpulseDE2_1.14.0.zip
StartedAt: 2021-05-05 18:16:39 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:17:58 -0400 (Wed, 05 May 2021)
EllapsedTime: 78.8 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/ImpulseDE2_1.14.0.tar.gz && rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ImpulseDE2_1.14.0.zip && rm ImpulseDE2_1.14.0.tar.gz ImpulseDE2_1.14.0.zip
###
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100 59744  100 59744    0     0  4032k      0 --:--:-- --:--:-- --:--:-- 4487k

install for i386

* installing *source* package 'ImpulseDE2' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ImpulseDE2'
    finding HTML links ... done
    ImpulseDE2Object-class                  html  
    append_strReport                        html  
    computeNormConst                        html  
    computeSizeFactors                      html  
    estimateImpulseParam                    html  
    estimateSigmoidParam                    html  
    evalImpulse                             html  
    evalImpulse_comp                        html  
    evalLogLikImpulse                       html  
    evalLogLikImpulse_comp                  html  
    evalLogLikMu                            html  
    evalLogLikMu_comp                       html  
    evalLogLikSigmoid                       html  
    evalLogLikSigmoid_comp                  html  
    evalSigmoid                             html  
    evalSigmoid_comp                        html  
    fitConstImpulse                         html  
    fitConstImpulseGene                     html  
    fitConstModel                           html  
    fitImpulseModel                         html  
    fitModels                               html  
    fitSigmoidGene                          html  
    fitSigmoidModel                         html  
    fitSigmoidModels                        html  
    get_accessors                           html  
    list_accession                          html  
    plotGenes                               html  
    plotHeatmap                             html  
    processData                             html  
    runDEAnalysis                           html  
    runDESeq2                               html  
    runImpulseDE2                           html  
    set_accessors                           html  
    simulateDataSetImpulseDE2               html  
    updateDEAnalysis                        html  
    writeReportToFile                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'ImpulseDE2' is deprecated and will be removed from
  Bioconductor version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'ImpulseDE2' is deprecated and will be removed from
  Bioconductor version 3.13
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ImpulseDE2' ...
** testing if installed package can be loaded
Warning: Package 'ImpulseDE2' is deprecated and will be removed from
  Bioconductor version 3.13
* MD5 sums
packaged installation of 'ImpulseDE2' as ImpulseDE2_1.14.0.zip
* DONE (ImpulseDE2)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'ImpulseDE2' successfully unpacked and MD5 sums checked