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INSTALL report for GGBase on tokay1

This page was generated on 2021-05-06 12:31:29 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the GGBase package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 735/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GGBase 3.52.0  (landing page)
VJ Carey
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/GGBase
Branch: RELEASE_3_12
Last Commit: 61410a4
Last Changed Date: 2020-10-27 10:33:19 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: GGBase
Version: 3.52.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GGBase_3.52.0.tar.gz && rm -rf GGBase.buildbin-libdir && mkdir GGBase.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GGBase.buildbin-libdir GGBase_3.52.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GGBase_3.52.0.zip && rm GGBase_3.52.0.tar.gz GGBase_3.52.0.zip
StartedAt: 2021-05-05 18:24:25 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:25:49 -0400 (Wed, 05 May 2021)
EllapsedTime: 84.3 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GGBase_3.52.0.tar.gz && rm -rf GGBase.buildbin-libdir && mkdir GGBase.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GGBase.buildbin-libdir GGBase_3.52.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GGBase_3.52.0.zip && rm GGBase_3.52.0.tar.gz GGBase_3.52.0.zip
###
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100  217k  100  217k    0     0  24.7M      0 --:--:-- --:--:-- --:--:-- 30.3M

install for i386

* installing *source* package 'GGBase' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GGBase'
    finding HTML links ... done
    MAFfilter                               html  
    finding level-2 HTML links ... done

    clipPCs                                 html  
    externalize                             html  
    make_smlSet                             html  
    plot_EvG                                html  
    rsid-class                              html  
    smlSet-class                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'GGBase' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'GGBase' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GGBase' ...
** testing if installed package can be loaded
Warning: Package 'GGBase' is deprecated and will be removed from Bioconductor
  version 3.13
* MD5 sums
packaged installation of 'GGBase' as GGBase_3.52.0.zip
* DONE (GGBase)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'GGBase' successfully unpacked and MD5 sums checked